
- Duration: 10 weeks
The Course modules contains
⦁ Introduction to Bioinformatics
⦁ Scope of bioinformatics: genomics, transcriptomics, proteomics.
⦁ Key databases: NCBI, Ensembl, UniProt.
⦁ Reading: Introduction to bioinformatics textbooks.
⦁ Sequence Analysis
⦁ Sequence alignment: BLAST, ClustalW.
⦁ Phylogenetic analysis and tree construction.
⦁ Practical: Run BLAST on a DNA sequence.
⦁ Genomics and Transcriptomics
⦁ Analyzing NGS data: RNA-Seq, ChIP-Seq.
⦁ Tools: Bioconductor, Galaxy, DESeq2.
⦁ Practical: Analyze an RNA-Seq dataset for differential expression.
⦁ Structural Bioinformatics
⦁ Protein structure prediction and visualization (PyMOL, Chimera).
⦁ Molecular docking basics.
⦁ Practical: Visualize a protein structure using PyMOL.
⦁ Programming and Data Management
⦁ Python and R for bioinformatics.
⦁ Data visualization and pipeline automation.
⦁ Practical: Write a Python script to parse a FASTA file.
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